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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818172.1_cds_XP_016499507.1_13425
CDS Infomation

[gene=LOC107818088] [db_xref=GeneID:107818088] [protein=protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X3] [protein_id=XP_016499507.1] [location=join(22796..22919,23431..23566,23905..23976,24090..24155,24730..24801,25176..25247,25316..25381,25832..25897,25975..26282,26466..26773,28219..28490,28918..29038,29352..29488,29571..29727,29841..29966)] [gbkey=CDS]
Sequence

ATGTTAATGGATGTATTTATTCTAGGAGTAAAATTACTGTTTCCCTCCACTTTCCTTTTA
TGGATTATCCTTACAAGCTCCTTCACTATTCCCGTGGTGCTTTCCAAAACAGACTCCCGC
CAAGTTTCTGCTCTCAACAATATGTACCAATATTTGAAGCCCTCTTCCAAACTTGAAGGA
TGGAAAAAGGATGGAGGAGACCCTTGTGGTGATGATTCTTGGCAGGGTATTAAGTGCTCT
GGTTCAGATATTATTGAAATTGATTTATCTGGCTTGGGACTTTCTGGATCACTAGGGTTC
CAGCTTGATAAGTTGGAGAAAGTCACCTACTTTGATGTGAGCAAAAACAACCTCAAGGAC
AACATACCGTATCAACTTCCTCCTCGCACGCAGCACCTGAATCTGAATCATAATAAGATA
AGTGGATCACTGAGTGATATGTTTGGACAACTTACTAAACTCACTGAGATGGATCTGTCC
TTCAATTCAATATCAGGCAGTTTGCCTCAGAGTTTCAGATCCCTCTCAAGCCTCAGCAAA
TTGCACATGCAGAATAATCAGTTTACTGGATCAATAAATGTTCTTGCCGATCTTCCACTT
GACGATTTGAATGTAGCAAACAACCAATTGACAGGCTGGATTCCTGATGAGCTGAAAGAC
ATAAAGAAATTAGAGACTGGAGGGAATTCTTGGTCTTCTGGAGCAGCTCCTCCTCCGCCT
CCTGGGCAGAAAAGTAAACCTCACACCGGGCGGTCAGGAAAGGAAGCTAAGTCTGGCCTG
GGCGCAGCAGCCATTATTGGGATAATACTGGGTGTTCTGTTGCTACTTATTTTTATAATT
GTTCTATTTTCGAAAAAAAGATCATCACCTTCATCCCATTTTCTTGAGGAAGATAGGTTT
AGCCAGCGTCAACGTTTCACTCCTCTTTCATCTCAGGAGTTATCTAGTGGCACACGTGGC
AACATGTGTGAGGACTTCAGAGATTCTTCATCCGCTACAGAAAAACATTTGCAAACCTCT
TCTTCGATGGTTCTTAAGCGTCTTACTTCAGAGCGACGCAAGTCTTTTAATGAGAAGGAG
TTGACAAATCCTCCAACTTCAAATCATCTCAAGTCGTTCAATGATAAAGAGTTTGCAAAT
CCTCTGAGTGCGAAGAGAAGCAGTTCAGTGCACTTAGCCTACTATCCGTTAGCTGATTTG
CAGAATGCAACTGGTAACTTTGCAAGTTCTCGCCTTCTTGGTGAGGGATCAATTGGTCGA
GTATACAGGGCAAAATATCCAGATGGCAGGGTTCTGGCGGTAAAGAAAATAGACTCCTCT
TTTTTCCAAGATAGGCAGTGCACAGAATTGGCAGACATTGCTTCCAAAGTTTCCAAGCTT
CACCACCCAAATATTGCTGAAGTGTTTGGTTATTGTTCAGAACAGGGACAGAATATGTTA
ATCTATGAGTATTTTAGGAATGGTTCACTTCATGAATTCCTACATGTGTCAGATGACTTC
AGCAAACCGCTTACATGGAATACAAGAGTCAGAATCGCTCTAGGTGCCGCTCGTGCTATT
GAGTACCTGCATGAGGTTTGTTCTCCATCCTGTCTCCACAGGAATATAAAAACTTCGAAC
ATCTTGCTAGACGCTGAACTGAATCCTCGTCTCTGTGAGTGTGGCTTGGCAATGTTTCAT
GAGCGTGCAAGCAGAAACTTGGATGCTGGATACACTGCTCCAGAATGCACAAAACCTTCT
GCTTATACTTTGAAGAGTGATGTTTACAGCTTCGGAGTTGTCATGTTGGAATTATTGACA
GGGCGAAAGCCTTTTGACAGTTCAAAGCCAAGATTAGAGCAGTATCTGGTCCAATGGGCA
TCGCCCCAACTACATGATCTAGATGCCTTGGAAAAAATGGCTGATCCTGCCCTGCGTGGA
CTTTATCCTCCTAAATCCCTCTCTCGATTTGCCGATGTGACTGCTTTGTGCGTGCAGTTG
GAGCCAGAATTCCGACCACACATGTCCGAGGTGGTGCAGGCACTAGTCCGTTTAGTGCAA
AGATCGAGCTTGAGCCAGAGAGAGGATCTAAGTGCATCTCGGCGGATAGATGATGATTAC
TGA

Peptide Sequence

PEP ID

XP_016499507.1
PEP Infomation

PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X3 [Nicotiana tabacum]
Sequence

MLMDVFILGVKLLFPSTFLLWIILTSSFTIPVVLSKTDSRQVSALNNMYQYLKPSSKLEG
WKKDGGDPCGDDSWQGIKCSGSDIIEIDLSGLGLSGSLGFQLDKLEKVTYFDVSKNNLKD
NIPYQLPPRTQHLNLNHNKISGSLSDMFGQLTKLTEMDLSFNSISGSLPQSFRSLSSLSK
LHMQNNQFTGSINVLADLPLDDLNVANNQLTGWIPDELKDIKKLETGGNSWSSGAAPPPP
PGQKSKPHTGRSGKEAKSGLGAAAIIGIILGVLLLLIFIIVLFSKKRSSPSSHFLEEDRF
SQRQRFTPLSSQELSSGTRGNMCEDFRDSSSATEKHLQTSSSMVLKRLTSERRKSFNEKE
LTNPPTSNHLKSFNDKEFANPLSAKRSSSVHLAYYPLADLQNATGNFASSRLLGEGSIGR
VYRAKYPDGRVLAVKKIDSSFFQDRQCTELADIASKVSKLHHPNIAEVFGYCSEQGQNML
IYEYFRNGSLHEFLHVSDDFSKPLTWNTRVRIALGAARAIEYLHEVCSPSCLHRNIKTSN
ILLDAELNPRLCECGLAMFHERASRNLDAGYTAPECTKPSAYTLKSDVYSFGVVMLELLT
GRKPFDSSKPRLEQYLVQWASPQLHDLDALEKMADPALRGLYPPKSLSRFADVTALCVQL
EPEFRPHMSEVVQALVRLVQRSSLSQREDLSASRRIDDDY

Transcript Sequence

Gene sequence data has not been registered.